PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0087s0083.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

E2F/DP

Protein Properties

Length: 467aa MW: 51471.3 Da PI: 4.8699

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0087s0083.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85.9	3.1e-27	137	202	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+g+++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+irwkg Kaladp0087s0083.1.p 137 RYDSSLGLLTKKFINLIKHAEDGMLDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIRWKG 202 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MSEPRASNRS APAPPQPTKR HLPFTSIKPP FPAPAAADYH RFDDRKFGGH DADAIVVRSP 60 QLKRKSMADD NEVASSNWTN STVYTEVDKS PLKKPVSAKG GRVYNKSKGS KGNKAAAQTP 120 LLTAGSPSAL TSAGNCRYDS SLGLLTKKFI NLIKHAEDGM LDLNKAAETL EVQKRRIYDI 180 TNVLEGIGLI EKKLKNRIRW KGLDVSQPDG VETDVSRLQI DVENLNLEEQ NLDDQIRGMQ 240 ERLRDLSEDE NNQKWLFVTE EDIKSLPCFQ NETLIAIKAP HGTTLEVPDP DEAANFPQRR 300 YRIVLRSTMG PIDVYLVSQF EEKFEDLNGA EQSVNCPVAS TSRPVENSGT RVANAQSTEN 360 DITGQAQDAH RVPSDTLMND NGSDDFVGGI MKIVPDVNAD TDYWFLSDAE LSVTELWHPE 420 SGIGNHLDDM PHHTDYDIGD TSIPQPQTPP SALMDIPSSS VNSTPR*

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MSEPRASNRS APAPPQPTKR HLPFTSIKPP FPAPAAADYH RFDDRKFGGH DADAIVVRSP  60
QLKRKSMADD NEVASSNWTN STVYTEVDKS PLKKPVSAKG GRVYNKSKGS KGNKAAAQTP  120
LLTAGSPSAL TSAGNCRYDS SLGLLTKKFI NLIKHAEDGM LDLNKAAETL EVQKRRIYDI  180
TNVLEGIGLI EKKLKNRIRW KGLDVSQPDG VETDVSRLQI DVENLNLEEQ NLDDQIRGMQ  240
ERLRDLSEDE NNQKWLFVTE EDIKSLPCFQ NETLIAIKAP HGTTLEVPDP DEAANFPQRR  300
YRIVLRSTMG PIDVYLVSQF EEKFEDLNGA EQSVNCPVAS TSRPVENSGT RVANAQSTEN  360
DITGQAQDAH RVPSDTLMND NGSDDFVGGI MKIVPDVNAD TDYWFLSDAE LSVTELWHPE  420
SGIGNHLDDM PHHTDYDIGD TSIPQPQTPP SALMDIPSSS VNSTPR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-150	E2F/DP family protein