PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0085s0131.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

ARF

Protein Properties

Length: 1200aa MW: 134229 Da PI: 6.7807

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0085s0131.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.2	1.4e-22	126	227	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 f+k+lt sd++++g +++p++ ae++ + +++ ++lt +d++ + W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F Kaladp0085s0131.1.p 126 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QELTARDLHDNMWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFI 213 99***************************954.4444.48********************************************** PP E-SSSEE..EEEEE-S CS B3 84 ldgrsefelvvkvfrk 99 +d++s+f +++++r+ Kaladp0085s0131.1.p 214 RDEKSQF--LLGIRRA 227 7766666..9999997 PP
2	Auxin_resp	118.4	5.9e-39	252	334	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras+ eFv++++k++ka++++ s+GmRf+m+fete+s rr++Gt++g+sdldpvrW++S+Wr+++ Kaladp0085s0131.1.p 252 AAHAAANNSPFTIFYNPRASPCEFVIPLAKYNKAMYTQASLGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKGSQWRNIQ 334 79******************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1200 aa Download sequence
MKAPTNGFPA NSGEGERKTI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE 60 TDCIPSYPNL PSKLICMLHN VTLHADPETD EVYAQMTLQP VTKYDKEALL ASDLGLKQNR 120 QPAEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQELTARD LHDNMWTFRH 180 IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKSQF LLGIRRANRQ QPALSSSVIS 240 SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPCEFVIPLA KYNKAMYTQA SLGMRFRMMF 300 ETEESGVRRY MGTITGISDL DPVRWKGSQW RNIQVGWDES TAGDRPSRVS LWEIEPVVTP 360 FYLCPPPFFR PKFPKQPGFP DDESDTENTL KRGMPWLDDF GIKDAATSIF PGLSLVQWMS 420 MQQNNQFPTA QSGFFPNMMS STALHNALGT DDPTKLLSFQ NHAPSQASIQ FNKSSQQNQV 480 HHFQQPPVTW PQHHQFQQLL QNPISMQQQQ QSQLVQQQQQ QQPQLVQQLQ QQPQLVQQQQ 540 QTLQQSSQQL SLQQQSQQMQ LQRQQSQQMQ AQQLSPQIQQ QQQQAPHLQQ HQPQAPHLQQ 600 HQQQALHLQQ QQAPQATHQQ PQSQPQPQPQ PQPQSRPQTQ PQQHQQMQSQ QQPHNIVSKS 660 LVGNGLVTGS QIPAQKPLQP VMSSALQQQL LASNDTNQQV GSSKSPYHVV SSAEMQFQHQ 720 LEPQSTFVQK PLGSQPQLQQ SPPHLLQQHE VLQRPQHLSQ VLQSSQSHKS LVEHQLQLQM 780 LQKLQQQQQQ QQSPHQAQPK QHQESQIAPV ISSLQPQLLQ QLPQPNQHSM FQSLSQHQQS 840 TVSQPQQFSV TQLQIQQKAL ATVRAHSGLT EGEAPSCSTS PSTNYCQVSP TNFLNRNGQG 900 LAGEFGFEQA NLDQELQNKA DVRVKHEQPS LRGPDAMKYR GNDHMEASSS ATSYCLDANN 960 FQSNFSIPTL LDGDAQSHPR NSFSFVPNTE GLAPDTLMTT GYDSGKDLQN LLSNYDTAPR 1020 DLEAELSTAA ISSQSFGVPN MSFKPGCSGD ISISDAGVIG AGMWSNQTQR MRTYTKVQKR 1080 GSVGRSIDVT RYSGYDELKH DLARMFGIEG QLDDPQRTDW KLVYVDHEND ILLVGDDPWE 1140 EFVSCVQSIK ILSSAEVQQM SLDGDLGNVV IPNQACSGSD SGNAWRGNYD DTSAVSFNR*

Sequence ? help Back to Top

Protein Sequence Length: 1200 aa Download sequence

MKAPTNGFPA NSGEGERKTI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE  60
TDCIPSYPNL PSKLICMLHN VTLHADPETD EVYAQMTLQP VTKYDKEALL ASDLGLKQNR  120
QPAEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQELTARD LHDNMWTFRH  180
IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKSQF LLGIRRANRQ QPALSSSVIS  240
SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPCEFVIPLA KYNKAMYTQA SLGMRFRMMF  300
ETEESGVRRY MGTITGISDL DPVRWKGSQW RNIQVGWDES TAGDRPSRVS LWEIEPVVTP  360
FYLCPPPFFR PKFPKQPGFP DDESDTENTL KRGMPWLDDF GIKDAATSIF PGLSLVQWMS  420
MQQNNQFPTA QSGFFPNMMS STALHNALGT DDPTKLLSFQ NHAPSQASIQ FNKSSQQNQV  480
HHFQQPPVTW PQHHQFQQLL QNPISMQQQQ QSQLVQQQQQ QQPQLVQQLQ QQPQLVQQQQ  540
QTLQQSSQQL SLQQQSQQMQ LQRQQSQQMQ AQQLSPQIQQ QQQQAPHLQQ HQPQAPHLQQ  600
HQQQALHLQQ QQAPQATHQQ PQSQPQPQPQ PQPQSRPQTQ PQQHQQMQSQ QQPHNIVSKS  660
LVGNGLVTGS QIPAQKPLQP VMSSALQQQL LASNDTNQQV GSSKSPYHVV SSAEMQFQHQ  720
LEPQSTFVQK PLGSQPQLQQ SPPHLLQQHE VLQRPQHLSQ VLQSSQSHKS LVEHQLQLQM  780
LQKLQQQQQQ QQSPHQAQPK QHQESQIAPV ISSLQPQLLQ QLPQPNQHSM FQSLSQHQQS  840
TVSQPQQFSV TQLQIQQKAL ATVRAHSGLT EGEAPSCSTS PSTNYCQVSP TNFLNRNGQG  900
LAGEFGFEQA NLDQELQNKA DVRVKHEQPS LRGPDAMKYR GNDHMEASSS ATSYCLDANN  960
FQSNFSIPTL LDGDAQSHPR NSFSFVPNTE GLAPDTLMTT GYDSGKDLQN LLSNYDTAPR  1020
DLEAELSTAA ISSQSFGVPN MSFKPGCSGD ISISDAGVIG AGMWSNQTQR MRTYTKVQKR  1080
GSVGRSIDVT RYSGYDELKH DLARMFGIEG QLDDPQRTDW KLVYVDHEND ILLVGDDPWE  1140
EFVSCVQSIK ILSSAEVQQM SLDGDLGNVV IPNQACSGSD SGNAWRGNYD DTSAVSFNR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein