PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0082s0162.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 313aa    MW: 33148.4 Da    PI: 5.0265
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0082s0162.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH331.1e-10161205554
                          HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          h+++Er RR+ri ++f  L+ l+P++      K + a++L + v+Y+k L
  Kaladp0082s0162.1.p 161 HSIAERLRRERIAERFKALQALVPTC-----NKTDRAAMLDEIVDYVKFL 205
                          99***********************8.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MANDPPEGYG DEFLEQILAI PSYGNHLGET TSSVVFPTGP APGDASGSGE RSSYEGGSVF  60
PLGLSLDSAF PSTIVAASGA GDGSLAAPGR REGQPVQIGS MYPAFGHIQP HSMRVQPGLP  120
QFNQTFSSQQ SSPGLMTPVA PQPPPMCPRV RARRGQATDP HSIAERLRRE RIAERFKALQ  180
ALVPTCNKTD RAAMLDEIVD YVKFLRLQVK VLSMSRLGGA GAVAQLVADA TLPTAGREVS  240
EGGSHQIDED RWSTDDIERE VARLMDENVG AAMQLLQSKS LCIMPISLAA AIFPAHQLEG  300
STEMKSEPNA PS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166171RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.36e-51bHLH family protein