PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0082s0127.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HSF

Protein Properties

Length: 468aa MW: 52181.8 Da PI: 5.7113

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0082s0127.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.9	5e-36	18	108	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 Fl k+y++++d++++e++sws+ +nsfvv+d+ efa+++Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F k++k Kaladp0082s0127.1.p 18 FLLKTYDMVDDSSTDEIVSWSAANNSFVVWDPPEFARTLLPTYFKHNNFSSFIRQLNTYGFHKIDPEK---------WEFANEDFVKDQK 98 9******************999*************************************999.........********* PP XXXXXXXXXX CS HSF_DNA-bind 92 ellekikrkk 101 +ll++i+r+k Kaladp0082s0127.1.p 99 HLLKNIHRRK 108 ******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MDLATVAAGG GGGGPAPFLL KTYDMVDDSS TDEIVSWSAA NNSFVVWDPP EFARTLLPTY 60 FKHNNFSSFI RQLNTYGFHK IDPEKWEFAN EDFVKDQKHL LKNIHRRKPI HSHSIPQASA 120 IDPDRAAFEE EIEGLTREKI EYEAMILKFE EQHSSVKVHL DTLTQRVGGL ELRQQHLLSF 180 LEKAIQNPTF VDRLSKKIES MHFSAYSKKR RLPQNESYHP ITDSSFTDDQ SSSRPVIGQM 240 FHQDFSNKLN LALSPCVTDA HLVSRSTQSS NEGGKSSQRI VCEGSQREAQ LRSECAPFSP 300 DTVELSDTGT SFTFNMNLSL PCKMATSGNM CLKTAEEGDG LGLCHLNLSL ASSPLQTNRN 360 QCQVDPEHGG TSESRSSANE KDTPKHNTSE VIPSLQEVQS SNQAQLAAPQ PRVNDAFWEQ 420 YLTERPGCSD NEEASSNYKS NIYDALEDRR SRQGTSPNLN TSNRLSL*

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MDLATVAAGG GGGGPAPFLL KTYDMVDDSS TDEIVSWSAA NNSFVVWDPP EFARTLLPTY  60
FKHNNFSSFI RQLNTYGFHK IDPEKWEFAN EDFVKDQKHL LKNIHRRKPI HSHSIPQASA  120
IDPDRAAFEE EIEGLTREKI EYEAMILKFE EQHSSVKVHL DTLTQRVGGL ELRQQHLLSF  180
LEKAIQNPTF VDRLSKKIES MHFSAYSKKR RLPQNESYHP ITDSSFTDDQ SSSRPVIGQM  240
FHQDFSNKLN LALSPCVTDA HLVSRSTQSS NEGGKSSQRI VCEGSQREAQ LRSECAPFSP  300
DTVELSDTGT SFTFNMNLSL PCKMATSGNM CLKTAEEGDG LGLCHLNLSL ASSPLQTNRN  360
QCQVDPEHGG TSESRSSANE KDTPKHNTSE VIPSLQEVQS SNQAQLAAPQ PRVNDAFWEQ  420
YLTERPGCSD NEEASSNYKS NIYDALEDRR SRQGTSPNLN TSNRLSL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-142	HSF family protein