PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0082s0004.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 221aa MW: 25217.8 Da PI: 6.5214 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.9 | 4.3e-09 | 71 | 119 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ rE+ RR+r N+++ eL +++ +a + + +K++iL A++ +k+L+ Kaladp0082s0004.1.p 71 MKALREKLRRERFNDKLLELSSIIDPA---RLARSDKVAILDDAIRILKQLK 119 6778***********************...********************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MEDDCLHFDF LDYDFINDTL PSDLCWLNQS ACPEVQLNST SCASNEREST GDAKESTRKR 60 LRTKSCCKAE MKALREKLRR ERFNDKLLEL SSIIDPARLA RSDKVAILDD AIRILKQLKT 120 EAQELEEARK KLNDEINNLK AEKYELREEK VTLKAEKERI EQQMKLIAPA SFVPSHPASY 180 HPVANKMPVI PGYGLVPMWR YLPTSAVDTS KDHELRPPAA * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14410.2 | 5e-59 | bHLH family protein |