PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0081s0148.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GATA
Protein Properties Length: 261aa    MW: 28307.6 Da    PI: 7.0403
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0081s0148.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.43e-16217251133
                 GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkk 33 
                          C nCgt +  Tp++Rrgp+g++tLCnaCGl+++ k
  Kaladp0081s0148.2.p 217 CKNCGTGSkhTPMMRRGPEGPRTLCNACGLKWANK 251
                          ******9999**********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MSSDYSNESI NMQTLMDNAD EDAFVDGEEF ADSGVAGQFE HHLVGDDGVR DGAFTDPIDA  60
VHPHRHSMSA PPPGVDFSTA CSPSQLTLSF HGEVYVFDDV SAEKVQAVLL LLGGYEVPGG  120
DHTGLKPQNQ RSAGDVYGRA MTPTLRAAAL RRFREKKKDR CFEKKIRYTV RKEVAHRMKR  180
NKGQFVSSKA SSEDIGSGSS DGNAYPGAVK EEHETSCKNC GTGSKHTPMM RRGPEGPRTL  240
CNACGLKWAN KVVLGQCPRN *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151159RRFREKKKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-53GATA family protein