PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0081s0067.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 596aa    MW: 64754.7 Da    PI: 5.7106
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0081s0067.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.28.1e-10179224149
                          CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHH CS
                  HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAve 49 
                          +r++h ++Er+RR+++N+ +  Lr+l+P +   + ++ + a+i    +e
  Kaladp0081s0067.1.p 179 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGSIE 224
                          79***************************9...8888888888777666 PP
2HLH34.14.8e-11449500155
                          CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +r++h ++Er+RR+++N+ +  Lr+l+P +   + ++ + a+i    +e++++L+
  Kaladp0081s0067.1.p 449 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGSIEFVRELE 500
                          79****************************...9****************99985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 596 aa     Download sequence    
MAPGAPAYAP VPEYSDQQQH MQQLMKARAP PFTVPQHRSQ GGPSSSPMVD YTLNNNFNHQ  60
QQEQNALLAG FSDVMQFADF GPKLGLNQSK MSSDDETGID PVYFLKFPVL NDKLEEEGGE  120
QLLGVGEGEP AGADQVGFEK SVVAAATAAP GDQAAAAASG KNKRKRGRAV KTSEEVESQR  180
MTHIAVERNR RKQMNEHLRV LRSLMPGSYV QRGDQASIIG GSIEFGRELE QLLQCLVSQK  240
RRRLYGDNPS NSNPATRQIG GGVMGDATTV TGLVQQQQQH PMMFPPPNCL SNVAGDHQTG  300
FDAAVDQEEE IAENKSCLAD VEVKVLGFDA MIKILSRRRP GQLIRTIAAL EDLKLVIMHT  360
NITTIEQSVL YSFNVKFPVL NDKLEEEGGE QLLGVGEGEP AGADQVGFEK SVVAAATAAP  420
GDQAAAAASG KNKRKRGRAV KTSEEVESQR MTHIAVERNR RKQMNEHLRV LRSLMPGSYV  480
QRGDQASIIG GSIEFVRELE QLLQCLESQK RRRLYGDNPS NSNPATRQIG GGVMGDATTV  540
TGLVQQQQQH PMMFPPPNCL SNVPGDRQTG FDAAVDQEEE IAENKACLSD GEVRC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1180191RMTHIAVERNRR
2240244KRRRL
3450461RMTHIAVERNRR
4510514KRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24140.13e-78bHLH family protein