PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0081s0065.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 405aa MW: 44376.9 Da PI: 5.9747

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0081s0065.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.9	2.8e-11	179	230	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i +e++++L+ Kaladp0081s0065.2.p 179 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGSIEFVRELE 230 79**************************...9**************99985 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MAPGAPAYAP VPEYSDQQQH MQQLMKARAP PFTVPQHRSH GGPSSSLMVD YTLNNNFNHQ 60 QQEQNTLLAG FSDVMQFADF GPKLGLNQSK MSSDDETGID PVYFLKFPVL NDKLEEEGGE 120 QLLGVGEGEP AGADQVGFEK SVVAAATAAP GDQAAAAVSG KNKRKRGRAV KTTEEVESQR 180 MTHIAVERNR RKQMNEHLRV LRSLMPGSYV QRGDQASIIG GSIEFVRELE QLLQCLESQK 240 RRRLYGDNPS NSNPATRQIG GGVMGDATTV TGLVQQQQQH PMMFPPPNCL SNVPGDHQTG 300 FDAAVDQEEE IAENKSCLAD VEVKVLGFDA MIKILSRRRP GQLIRTIAAL EDLKLVIMHT 360 NITTIEQTVL YSFNVKVSSE TRYSAEDIAS SVQQIFSFIH AHTS*

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MAPGAPAYAP VPEYSDQQQH MQQLMKARAP PFTVPQHRSH GGPSSSLMVD YTLNNNFNHQ  60
QQEQNTLLAG FSDVMQFADF GPKLGLNQSK MSSDDETGID PVYFLKFPVL NDKLEEEGGE  120
QLLGVGEGEP AGADQVGFEK SVVAAATAAP GDQAAAAVSG KNKRKRGRAV KTTEEVESQR  180
MTHIAVERNR RKQMNEHLRV LRSLMPGSYV QRGDQASIIG GSIEFVRELE QLLQCLESQK  240
RRRLYGDNPS NSNPATRQIG GGVMGDATTV TGLVQQQQQH PMMFPPPNCL SNVPGDHQTG  300
FDAAVDQEEE IAENKSCLAD VEVKVLGFDA MIKILSRRRP GQLIRTIAAL EDLKLVIMHT  360
NITTIEQTVL YSFNVKVSSE TRYSAEDIAS SVQQIFSFIH AHTS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	180	191	RMTHIAVERNRR
2	240	244	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-115	bHLH family protein