PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0081s0065.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 422aa MW: 46096.8 Da PI: 5.7993

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0081s0065.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.8	3e-11	196	247	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i +e++++L+ Kaladp0081s0065.1.p 196 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGSIEFVRELE 247 79**************************...9**************99985 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MSMDKVESYS AAASSSSMAP GAPAYAPVPE YSDQQQHMQQ LMKARAPPFT VPQHRSHGGP 60 SSSLMVDYTL NNNFNHQQQE QNTLLAGFSD VMQFADFGPK LGLNQSKMSS DDETGIDPVY 120 FLKFPVLNDK LEEEGGEQLL GVGEGEPAGA DQVGFEKSVV AAATAAPGDQ AAAAVSGKNK 180 RKRGRAVKTT EEVESQRMTH IAVERNRRKQ MNEHLRVLRS LMPGSYVQRG DQASIIGGSI 240 EFVRELEQLL QCLESQKRRR LYGDNPSNSN PATRQIGGGV MGDATTVTGL VQQQQQHPMM 300 FPPPNCLSNV PGDHQTGFDA AVDQEEEIAE NKSCLADVEV KVLGFDAMIK ILSRRRPGQL 360 IRTIAALEDL KLVIMHTNIT TIEQTVLYSF NVKVSSETRY SAEDIASSVQ QIFSFIHAHT 420 S*

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MSMDKVESYS AAASSSSMAP GAPAYAPVPE YSDQQQHMQQ LMKARAPPFT VPQHRSHGGP  60
SSSLMVDYTL NNNFNHQQQE QNTLLAGFSD VMQFADFGPK LGLNQSKMSS DDETGIDPVY  120
FLKFPVLNDK LEEEGGEQLL GVGEGEPAGA DQVGFEKSVV AAATAAPGDQ AAAAVSGKNK  180
RKRGRAVKTT EEVESQRMTH IAVERNRRKQ MNEHLRVLRS LMPGSYVQRG DQASIIGGSI  240
EFVRELEQLL QCLESQKRRR LYGDNPSNSN PATRQIGGGV MGDATTVTGL VQQQQQHPMM  300
FPPPNCLSNV PGDHQTGFDA AVDQEEEIAE NKSCLADVEV KVLGFDAMIK ILSRRRPGQL  360
IRTIAALEDL KLVIMHTNIT TIEQTVLYSF NVKVSSETRY SAEDIASSVQ QIFSFIHAHT  420
S*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	197	208	RMTHIAVERNRR
2	257	261	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-114	bHLH family protein