PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0081s0037.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 462aa MW: 50784.2 Da PI: 7.0965 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.2 | 7.2e-09 | 281 | 328 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Kaladp0081s0037.1.p 281 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 328 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 462 aa Download sequence |
MEKELFPWTQ NQNPATYCSP DMSFYTTTSN SNWDHSLDQF ESALSSMVSS PAASATPASA 60 SAGVHLIELI GKLGTISSHS YIPNHIHSAD NSCYTTPINS PPKLNLDQMP AFATDPGFAE 120 RAARFSCFGS RSFNGRIGGS LFPDSDMAYN NTQLDGSAKY FPGSASHLDG VHIQDTTTTN 180 TNNKLPSDSK EESSVSQKVQ SNEAMGRKRK SAPRGKPKET QSSKAAMESN DSDSKRTKSD 240 ENEKGRKSGG HQKQSKDNSK PPEPPKDYIH VRARRGQATD SHSLAERVRR EKISERMKFL 300 QDLVPGCNKV TGKAVMLDEI INYVQSLQRQ VEFLSMKLAT VNPRMDSVHM EALLSKEILQ 360 SRTTLYPVES SNSASAAFPY AYQTQDPSRL PNATTDSQFC NNSLNNDHLR QSHHHGLQLP 420 SVDGFCNSAT QVSMWEDELH NVVQMGFGAG SMEPSQMKME P* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G07340.1 | 3e-85 | bHLH family protein |