PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0081s0031.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 378aa    MW: 40950.9 Da    PI: 8.3839
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0081s0031.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.85.9e-11310355655
                          HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +++Er RR ri  ++ +L++l+P+     +k  s a++L +Av++Ik Lq
  Kaladp0081s0031.1.p 310 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYADMLDLAVQHIKGLQ 355
                          689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MFPSSNSSSQ SQQSMAGSSL IRNGSAPGSV LNRAVDSVLN NNSSSNNNAD SHHDFSPFLS  60
PPNFNLPQHH QPAYHQYFSA DSSSISSDSN CKVNNLNHHP ASDPKHSDSK RLQRSGTGLN  120
DFNIDDFSMA ANLKIGEGGG SSSSSPALVR HSSSPAGFLN QLTADLGGFS VPRGSGNYSR  180
GSSSNGPGTS RLKPQLSFTR QDSNMSQLSG ITENIIDGLN QNSGHREAHN YTYANDAWDS  240
GASITFSGPP SKRNKNEEEY LNCFSGLEHQ FSLPQTTLEM ATVEKLLQIP EDSVPCKIRA  300
KRGFATHPRS IAERERRTRI SGKLKKLQDL VPNMDKQTSY ADMLDLAVQH IKGLQNQVQK  360
LNKDMENCTC GCKRSTS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43140.21e-68bHLH family protein