PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0080s0023.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 210aa MW: 23562.4 Da PI: 6.6067 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.4 | 4.5e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+ks rqvtfskR+ g++KKA+ELSvLCd++vav ifss+gk+yeyss Kaladp0080s0023.1.p 9 KRIEDKSSRQVTFSKRKSGLMKKANELSVLCDVDVAVFIFSSKGKMYEYSS 59 79***********************************************96 PP | |||||||
2 | K-box | 19.6 | 3.8e-08 | 87 | 151 | 13 | 77 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqi 77 + ++++ e a L i+ ++ +R l ++L++ eL qL q+Le+ l++ R kK++ + e+ Kaladp0080s0023.1.p 87 TKQKCHAEDAGLSGSINLMRLINRSLDPTTDNPLNVPELTQLDQHLEDLLRHTRFKKEQAMWESA 151 45777888888888888888777888888889****************************98864 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MGRGKVELKR IEDKSSRQVT FSKRKSGLMK KANELSVLCD VDVAVFIFSS KGKMYEYSSG 60 SSLKRILEHH QSPFEAENAA RKHVLETKQK CHAEDAGLSG SINLMRLINR SLDPTTDNPL 120 NVPELTQLDQ HLEDLLRHTR FKKEQAMWES ALATVEEEGH SNQRLKHFQG DDETGGRSIY 180 ELQNPFLESP SAHFISPDAV DDDSSPPRG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30260.1 | 2e-35 | MIKC_MADS family protein |