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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0079s0185.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | AP2 | ||||||||
Protein Properties | Length: 541aa MW: 59993.7 Da PI: 7.1856 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.4 | 5.6e-16 | 277 | 336 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g Kaladp0079s0185.1.p 277 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 336 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 46.8 | 7.3e-15 | 379 | 430 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Kaladp0079s0185.1.p 379 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 430 57****************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 541 aa Download sequence |
MKCSMSNENA AAAATTNINH TSWLGFSLAP RMTMELPLDS HHQPVPYSSA APTLPSTYFH 60 TLPNLDASRN CYGLENGDYS SSGFPAMPLN SDGSLCIMGA SMCTVSLSHA PKLEDFFGGG 120 TMGSRECEAK DRQAAMALSL DSTCYQQQTT DQETSTSLHF LHNLQDGMRP QQIEIQHHPL 180 YCLPSSLGDD DHYELKNCSN DDALGERVNH VGFGDLQALT LSMSPGSQSG NAFASQRVPH 240 PAVEPLWLDS KKRGVEKVNQ KPIVHRKSID TFGQRTSQYR GVTRHRWTGR YEAHLWDNSC 300 KKEGQSRKGR QVYLGGYDME EKAARAYDLA ALKYWGSSTH INFPVENYQQ ELEAMKNMSR 360 QEYVANLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA 420 YDIAAIKFRG VSAVTNFDIT RYNVERIIES STLPSGDLAR RSKEPEPITA HAADQHLTNT 480 ESPNIASPGS QHDSMSFHQM PPQLTAHHKP QLQHYSAVIS ESDEVANYVS KAPSQVTSFK 540 * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-139 | AP2 family protein |