PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0079s0185.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family AP2
Protein Properties Length: 541aa    MW: 59993.7 Da    PI: 7.1856
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0079s0185.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.45.6e-16277336155
                  AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          s+y+GV++++++gr++A+++d  ++  g  ++ ++++lg ++ +e+Aa+a++ a++k++g
  Kaladp0079s0185.1.p 277 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 336
                          78*******************988886678446*************************98 PP

2AP246.87.3e-15379430155
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  Kaladp0079s0185.1.p 379 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 430
                          57****************988532...5************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    
MKCSMSNENA AAAATTNINH TSWLGFSLAP RMTMELPLDS HHQPVPYSSA APTLPSTYFH  60
TLPNLDASRN CYGLENGDYS SSGFPAMPLN SDGSLCIMGA SMCTVSLSHA PKLEDFFGGG  120
TMGSRECEAK DRQAAMALSL DSTCYQQQTT DQETSTSLHF LHNLQDGMRP QQIEIQHHPL  180
YCLPSSLGDD DHYELKNCSN DDALGERVNH VGFGDLQALT LSMSPGSQSG NAFASQRVPH  240
PAVEPLWLDS KKRGVEKVNQ KPIVHRKSID TFGQRTSQYR GVTRHRWTGR YEAHLWDNSC  300
KKEGQSRKGR QVYLGGYDME EKAARAYDLA ALKYWGSSTH INFPVENYQQ ELEAMKNMSR  360
QEYVANLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA  420
YDIAAIKFRG VSAVTNFDIT RYNVERIIES STLPSGDLAR RSKEPEPITA HAADQHLTNT  480
ESPNIASPGS QHDSMSFHQM PPQLTAHHKP QLQHYSAVIS ESDEVANYVS KAPSQVTSFK  540
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-139AP2 family protein