PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0076s0003.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 274aa    MW: 29952.2 Da    PI: 6.5237
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0076s0003.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.31.6e-14112158455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           hn  Er+RR +iN+++  L++l+P +      K++Ka++L +A+eY++ Lq
  Kaladp0076s0003.1.p 112 VHNLTERKRRGKINEKMRALQDLIPYC-----NKVDKAAMLDEAIEYLRVLQ 158
                          6*************************8.....6****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MLVDTNNQTI DVMTKDLPGR PVERPASAFR AEGGLKVNQV SRNAQMERMD ADMNKKPAAA  60
ALPSLCSDNG GVNRLKRKHR DEEDWEDSSE DAEEESAIIR KVGSKRSRPT EVHNLTERKR  120
RGKINEKMRA LQDLIPYCNK VDKAAMLDEA IEYLRVLQLQ VQMMSMRAQM CALPMMAQPG  180
LQHPYTTAPS SQYLPLGMGY QAGALDMTTG FPAQAACFPG QFKPPPIFWN AAQGLPTSMP  240
GLLVPMPGAP PAPAPGSADE TPNSKDPLHE EAV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46970.14e-32bHLH family protein