PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0071s0331.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 252aa    MW: 27928 Da    PI: 10.4694
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0071s0331.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.78.5e-1356104255
                          HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                          +++h+e+E rRR+riN+ + +Lr +lP+ +      K +Ka+ L ++v+++k+Lq
  Kaladp0071s0331.1.p  56 KKSHSEAESRRRKRINDHLTTLRGILPSkL------KTDKATLLMETVQHVKELQ 104
                          789*************************66......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MQNDPFDNIL QNTVGQPTDM DKFVFPQRAS SFMAAPMTTA MMMATRFATN KPKAEKKSHS  60
EAESRRRKRI NDHLTTLRGI LPSKLKTDKA TLLMETVQHV KELQQKFAEV AGSGGEGGMK  120
PLLPTETDTV SVSRCQDEEV GEKNNLFVKA TVCCEDRPDL NRDLVQLVRS VQGKITRAEM  180
ASVGGRTKMV MTLKLTGGGG EEELRRVRRG LMAVVENRAS GRIGHSKRGR FVMPNRTDGY  240
GGMSNYNYSL R*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-31bHLH family protein