PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0071s0233.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 215aa    MW: 23325.4 Da    PI: 6.8613
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0071s0233.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260138.13e-43351341100
               DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                          +CaaCk+lrr+Ca++Cvlapyfp ++p+kf ++h++FGasn++k+l++lpe +r da+ss+vyeA ar+rdPvyG++g+i++lq+ql++l
  Kaladp0071s0233.1.p  35 PCAACKILRRRCAEKCVLAPYFPPSEPHKFTIAHRVFGASNIIKFLQDLPEPQRADAISSMVYEAGARIRDPVYGCAGTIFQLQKQLNEL 124
                          7***************************************************************************************** PP

               DUF260  91 kaelallkee 100
                          +aela++++e
  Kaladp0071s0233.1.p 125 QAELAKAQAE 134
                          ******9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MACHGDQAAV TGPRSVSHGE DSRAKCPRSG AVIGPCAACK ILRRRCAEKC VLAPYFPPSE  60
PHKFTIAHRV FGASNIIKFL QDLPEPQRAD AISSMVYEAG ARIRDPVYGC AGTIFQLQKQ  120
LNELQAELAK AQAEMVTMQC QQAQLVQTLF AMSNAPSSPE SSPDQQSSFC KGLIIGPSRS  180
PDSFRSNSSS LLEDDRPNGN PNSMWDMEET MCWS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.18e-57LBD family protein