PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0071s0216.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 189aa MW: 20907.5 Da PI: 9.0042 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 48.3 | 1.8e-15 | 58 | 109 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++++ + a+i A++Y+k+L+ Kaladp0071s0216.1.p 58 QRMTHIAVERNRRKQMNEYLAVLRTLMPSS---YAQRGDQASIIGGAINYVKELE 109 79****************************...*******************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MKFTTPDGLG IKESNGEDKQ SLLTTAPEPS PAKDPPVAAR RKRRRTKACK NKEEVENQRM 60 THIAVERNRR KQMNEYLAVL RTLMPSSYAQ RGDQASIIGG AINYVKELEQ LLQTLEAQKS 120 TKNPKQQDDH HSPFANFFTF PQYTAGATAA TPTSTTDGDD EVAAEGRHGA AEIEVTMVES 180 HANVKILAK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 41 | 45 | RKRRR |
2 | 41 | 46 | RKRRRT |
3 | 59 | 70 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22490.1 | 6e-42 | bHLH family protein |