PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0071s0013.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 240aa MW: 26784.6 Da PI: 6.5178 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27 | 8e-09 | 83 | 129 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + E+ RRd++N++f eL +l + + +K +Ka iL Av+ + +L Kaladp0071s0013.1.p 83 KACKEKMRRDKLNDRFMELGHVLDPG---RPPKSDKALILNDAVRLLTQL 129 5678******************9997...88**************99988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MMPSSPEDPS WVFDYALIDD LGLPDADVAS LHQGFNWSSS AQGFGCPPDL SVVADHSSVV 60 PDEIKDDASR KRVRSACATS GSKACKEKMR RDKLNDRFME LGHVLDPGRP PKSDKALILN 120 DAVRLLTQLR DETLKLKESN ENLHHKITEL KAEKNELRDE KQRLKMEKEK LEMQVNVFTM 180 QPSFLPRPSA IPAPFAAQGQ VTSGKFLPYV SYPAMPMWQF MPPTTVDTSQ DHVLRPPVA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 9e-81 | bHLH family protein |