PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0069s0107.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 650aa MW: 71343.3 Da PI: 6.2498

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0069s0107.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.9	0.00041	482	519	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le+++++++ +q Kaladp0069s0107.1.p 482 RQLIQDRIKELRELIPNgA------KCSIDSLLERTIKHMQFMQ 519 67799************77......7777779999999999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 650 aa Download sequence
MGADLQLLLR DLCSNTGWHY AIYWKLRPHH SRMVLTWEDA YFGSCGHNES QDYLTSGSYL 60 HDSLKLAMRA MSYDVYPFGE GIIGEVAASG NHRWVFGDKH VATSSSFVQE HNGWRSQFSA 120 GIKTVAIIAV APLGVVQLGS FYKIKENMKL ADQIKHSLSA LQISSVDVGA AGVQSNGGAL 180 GLPVDTDCRM LLHQESDTEQ LGQIYSKLMD GITPQLEVRM DSDASGISPT CDMDSVHALH 240 NLAFPFDDSG SGNSFPFHDS SNCESSDRVN FDLLDQYQDL HPSSHMNDKL DPQASLSHSE 300 SPAASLKFST GCELHEALGP AFSKQLSNYD KRMEAGKVKP AVEFSEGMGS TSSQLAPSSG 360 SEHLLEAVVA NILNNIKDYK SDRACKSMQS VLTTDYMPEA SSYGDHRNLS ADPSSSYPSS 420 GKDDIPHCLR TSEAYFTRSP TMLSSTCVSS CTEPVSKSSE TSKGNKKRAR PGEGSKPRPR 480 DRQLIQDRIK ELRELIPNGA KCSIDSLLER TIKHMQFMQS MSEHADKLKQ CAESKMQSKD 540 AVEGSSSHEQ GSSWAVEVGG HLKVCRILVE NVNMNRQMLI EMLCEECSHF LEIAEVIKSL 600 GLTILKGATE ACGDKTWICF LVEAQKNKSM QRLDILWSLV HVLQPKSSA*

Sequence ? help Back to Top

Protein Sequence Length: 650 aa Download sequence

MGADLQLLLR DLCSNTGWHY AIYWKLRPHH SRMVLTWEDA YFGSCGHNES QDYLTSGSYL  60
HDSLKLAMRA MSYDVYPFGE GIIGEVAASG NHRWVFGDKH VATSSSFVQE HNGWRSQFSA  120
GIKTVAIIAV APLGVVQLGS FYKIKENMKL ADQIKHSLSA LQISSVDVGA AGVQSNGGAL  180
GLPVDTDCRM LLHQESDTEQ LGQIYSKLMD GITPQLEVRM DSDASGISPT CDMDSVHALH  240
NLAFPFDDSG SGNSFPFHDS SNCESSDRVN FDLLDQYQDL HPSSHMNDKL DPQASLSHSE  300
SPAASLKFST GCELHEALGP AFSKQLSNYD KRMEAGKVKP AVEFSEGMGS TSSQLAPSSG  360
SEHLLEAVVA NILNNIKDYK SDRACKSMQS VLTTDYMPEA SSYGDHRNLS ADPSSSYPSS  420
GKDDIPHCLR TSEAYFTRSP TMLSSTCVSS CTEPVSKSSE TSKGNKKRAR PGEGSKPRPR  480
DRQLIQDRIK ELRELIPNGA KCSIDSLLER TIKHMQFMQS MSEHADKLKQ CAESKMQSKD  540
AVEGSSSHEQ GSSWAVEVGG HLKVCRILVE NVNMNRQMLI EMLCEECSHF LEIAEVIKSL  600
GLTILKGATE ACGDKTWICF LVEAQKNKSM QRLDILWSLV HVLQPKSSA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	2e-87	bHLH family protein