PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0069s0014.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 342aa    MW: 37572.6 Da    PI: 6.0357
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0069s0014.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.6e-174391355
                  AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         + GVr+++ +gr++AeIrdp++   + r++lg+f+ta eAa a+++a+++++g
  Kaladp0069s0014.1.p 43 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAHEAALAYDRAALSMKG 91
                         56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MNTTQDTTSI REQKGLSLRP TGTAYGSECR RIGRRRQAEP GRFLGVRRRP WGRYAAEIRD  60
PTTKERHWLG TFDTAHEAAL AYDRAALSMK GTQARTNFVY PDSSGSPLHS LLTPFSPSHS  120
VFNADHQCSK QKLTSSQTIT CCHSCVCRSV QCPYATQTSL YDHQKAGDDH VLFAVGSEYN  180
SGDLSCIVPE VCLKPPASTC TDDSSKDYLS LGSPRTDQNW GFKNSTAPDA NLLSPELQLQ  240
YDNLKDVASM TTTVVKNADH EIGWISRLSN SNGFWSDAED QNLLWEMNYG ELAALISNPM  300
KMGEDNNVSF QVATPSSASA ATYSASIADF GDVIDFSYPL F*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.13e-49ERF family protein