PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0067s0152.9.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MIKC_MADS

Protein Properties

Length: 220aa MW: 24779.7 Da PI: 9.9911

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0067s0152.9.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87.8	5.9e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+ rqvtfskRr+g+lKKA+ELS+LCda+v v+ifsstgkly+y+s Kaladp0067s0152.9.p 9 KRIENTNSRQVTFSKRRKGLLKKAKELSILCDAQVGVMIFSSTGKLYDYAS 59 79***********************************************86 PP
2	K-box	56.9	9.3e-20	82	151	9	78
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqie 78 + +++ + +++e+a L++++++Lq+ +R++ e+L sL++keLq+Le+qLe lk iR kK l+ ++ Kaladp0067s0152.9.p 82 NPSSEVKFWKNEVATLQQQLQSLQEDHRKVFTEELASLTIKELQHLENQLEMNLKCIRMKKGSLIQQENL 151 668899********************************************************99988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MGRGKIVIKR IENTNSRQVT FSKRRKGLLK KAKELSILCD AQVGVMIFSS TGKLYDYASK 60 ASIKATIEEY NKLKGDQLHP ANPSSEVKFW KNEVATLQQQ LQSLQEDHRK VFTEELASLT 120 IKELQHLENQ LEMNLKCIRM KKGSLIQQEN LDLHNQAMCH IKNIQVHDMR APNVVKAAPL 180 RMDNVCGENG TPVHVQLQLR QPQPQPQSTE LASGNVIMG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57230.1	1e-66	MIKC_MADS family protein