PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0067s0152.8.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 211aa    MW: 23740.4 Da    PI: 10.0047
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0067s0152.8.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.95.5e-28959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krien+  rqvtfskRr+g+lKKA+ELS+LCda+v v+ifsstgkly+y+s
  Kaladp0067s0152.8.p  9 KRIENTNSRQVTFSKRRKGLLKKAKELSILCDAQVGVMIFSSTGKLYDYAS 59
                         79***********************************************86 PP
2K-box57.65.5e-2082161988
                K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelq 88 
                          + +++ + +++e+a L++++++Lq+ +R++  e+L sL++keLq+Le+qLe  lk iR kK  l+ ++  +l ++ ++++
  Kaladp0067s0152.8.p  82 NPSSEVKFWKNEVATLQQQLQSLQEDHRKVFTEELASLTIKELQHLENQLEMNLKCIRMKKGSLIQQENLDLHNQVHDMR 161
                          668899***********************************************************999888877777665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MGRGKIVIKR IENTNSRQVT FSKRRKGLLK KAKELSILCD AQVGVMIFSS TGKLYDYASK  60
ASIKATIEEY NKLKGDQLHP ANPSSEVKFW KNEVATLQQQ LQSLQEDHRK VFTEELASLT  120
IKELQHLENQ LEMNLKCIRM KKGSLIQQEN LDLHNQVHDM RAPNVVKAAP LRMDNVCGEN  180
GTPVHVQLQL RQPQPQPQST ELASGNVIMG *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.14e-66MIKC_MADS family protein