PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0067s0152.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 242aa MW: 27388.7 Da PI: 9.8212 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.6 | 7e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+ rqvtfskRr+g+lKKA+ELS+LCda+v v+ifsstgkly+y+s Kaladp0067s0152.1.p 9 KRIENTNSRQVTFSKRRKGLLKKAKELSILCDAQVGVMIFSSTGKLYDYAS 59 79***********************************************86 PP | |||||||
2 | K-box | 74.9 | 2.2e-25 | 86 | 175 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++ + +++e+a L++++++Lq+ +R++ e+L sL++keLq+Le+qLe lk iR kK+e+++++i+el++k +q+en +L+++ Kaladp0067s0152.1.p 86 EVKSTLQFWKNEVATLQQQLQSLQEDHRKVFTEELASLTIKELQHLENQLEMNLKCIRMKKDEIMMAKIDELRQKGSLIQQENLDLHNQA 175 456779********************************************************************************9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGRGKIVIKR IENTNSRQVT FSKRRKGLLK KAKELSILCD AQVGVMIFSS TGKLYDYASK 60 ASIKATIEEY NKLKGDQLHP ANPSSEVKST LQFWKNEVAT LQQQLQSLQE DHRKVFTEEL 120 ASLTIKELQH LENQLEMNLK CIRMKKDEIM MAKIDELRQK GSLIQQENLD LHNQAMCHIK 180 NIQVHDMRAP NVVKAAPLRM DNVCGENGTP VHVQLQLRQP QPQPQSTELA SGNVIMGLHL 240 N* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57230.1 | 9e-71 | MIKC_MADS family protein |