PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0067s0150.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 238aa    MW: 27208.1 Da    PI: 7.2851
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0067s0150.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.19.6e-28959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         +ri+n++ rqvtfskRr+g+lKKA+ELS+LCd++v v+ifsstgkly+++s
  Kaladp0067s0150.2.p  9 ERIDNTTSRQVTFSKRRKGLLKKAKELSILCDVQVGVMIFSSTGKLYDFAS 59
                         69***********************************************86 PP
2K-box84.72e-2870168197
                K-box   1 yqkssgks..leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelq 88 
                          y+k +g++  le++++e +++e+a L+ ++++Lq+ +R++ Ge+L+sL+++eLq+Le+qLe  lk iR kK+e+++++ieel kke+ +q
  Kaladp0067s0150.2.p  70 YNKLKGNQlhLENSNSEFWKNEAATLQHQLQSLQEDHRKVFGEELSSLTIQELQHLENQLEMNLKCIRMKKDEIMVAEIEELHKKERLIQ 159
                          5667777777999***************************************************************************** PP

                K-box  89 eenkaLrkk 97 
                          +en +Lr++
  Kaladp0067s0150.2.p 160 QENLDLRNQ 168
                          ******987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MGRGKIVIER IDNTTSRQVT FSKRRKGLLK KAKELSILCD VQVGVMIFSS TGKLYDFASN  60
ASIKSTIEQY NKLKGNQLHL ENSNSEFWKN EAATLQHQLQ SLQEDHRKVF GEELSSLTIQ  120
ELQHLENQLE MNLKCIRMKK DEIMVAEIEE LHKKERLIQQ ENLDLRNQAV CYIKNTEVHS  180
AQAPSRVKAA PLHTRELCWE DDTLEHVQLQ LSQPQPQPQP QGSELSPGNI MMGLHLN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.13e-69MIKC_MADS family protein