PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0066s0095.4.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARF
Protein Properties Length: 684aa    MW: 75897.4 Da    PI: 7.5648
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0066s0095.4.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B370.32.5e-22111212199
                          EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                          f+k+lt sd++++g +++ +k+a+e+     +++ + +++l  +d++g  W++k+i+r++++r++lt+GW+ Fv +++L +gD +vF   
  Kaladp0066s0095.4.p 111 FCKILTASDTSTHGGFSVRRKHANEClpqldMSEATPTQELAAKDLHGYDWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFL-- 198
                          99****************************9444445569************************************************.. PP

                          SSSEE..EEEEE-S CS
                   B3  86 grsefelvvkvfrk 99 
                          +  ++ l+v+v+r+
  Kaladp0066s0095.4.p 199 RGVDGDLRVGVRRH 212
                          3488889****997 PP
2Auxin_resp942.4e-31237316183
           Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                          a+ha++ +s F vvY+Pr+  s+F+++ +k+++++k+ +svG Rf m+fe+eds+err++Gt++g  d+++ +W+nSkWrsLk
  Kaladp0066s0095.4.p 237 ASHAVTAHSLFIVVYKPRT--SQFIISKNKYVESVKNGFSVGKRFTMRFEGEDSPERRFTGTIIGAGDISS-EWSNSKWRSLK 316
                          689***************6..9**********************************************777.*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 684 aa     Download sequence    
MEKDDLYVEL WKLCAGPLVD VPKQGEMVYY FPQGHMEQLE ASMNQELKQK IPLFNLPSEI  60
PCLVVNIQLL AEQETDEVYA HITLQPTTDK SEPTSPLECE LEQPKPPVRS FCKILTASDT  120
STHGGFSVRR KHANECLPQL DMSEATPTQE LAAKDLHGYD WRFKHIFRGQ PRRHLLTTGW  180
STFVTSKRLV AGDAFVFLRG VDGDLRVGVR RHARQQSIMP SSVISSQSMH LGVLATASHA  240
VTAHSLFIVV YKPRTSQFII SKNKYVESVK NGFSVGKRFT MRFEGEDSPE RRFTGTIIGA  300
GDISSEWSNS KWRSLKVQWD ESATIPRPDR VSPWEIEPFE PSSSVNLIQP VLKSKRPRPM  360
DPPANLVKLN ASVFWYSQMN KRCQIGHADN GSEVQGAVTH DLSWIRGSKE CNNLINIGAG  420
YSSRLGPEGM WPSTQFLKMY HGSTEDGKTT RSTSILSGCN SMVTTRPDNV PAVDQLGSTR  480
NMESPAGCRI FGIDFSKNLS TMIHSEREPA STSTAPVITS TVLLREDAVC MVDKKQDSLI  540
SSQELTKHVT DLSQKVTPTK NGTAGSSRTR TKVQMQGVAV GRAVDLFTLS GYTELILELE  600
KMFDIKGELL AGNQWAIVYT DTEGDQMLAG NDPWSEFCKM ARKITIYSSE EVKKLKPKSK  660
VAASALLLEG ISEKNVAIGD DIA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1355359KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61830.10.0ARF family protein