PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0066s0095.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ARF | ||||||||
Protein Properties | Length: 675aa MW: 75209.6 Da PI: 7.9243 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 70.3 | 2.5e-22 | 111 | 212 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+k+lt sd++++g +++ +k+a+e+ +++ + +++l +d++g W++k+i+r++++r++lt+GW+ Fv +++L +gD +vF Kaladp0066s0095.3.p 111 FCKILTASDTSTHGGFSVRRKHANEClpqldMSEATPTQELAAKDLHGYDWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFL-- 198 99****************************9444445569************************************************.. PP SSSEE..EEEEE-S CS B3 86 grsefelvvkvfrk 99 + ++ l+v+v+r+ Kaladp0066s0095.3.p 199 RGVDGDLRVGVRRH 212 3488889****997 PP | |||||||
2 | Auxin_resp | 94 | 2.3e-31 | 237 | 316 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++ +s F vvY+Pr+ s+F+++ +k+++++k+ +svG Rf m+fe+eds+err++Gt++g d+++ +W+nSkWrsLk Kaladp0066s0095.3.p 237 ASHAVTAHSLFIVVYKPRT--SQFIISKNKYVESVKNGFSVGKRFTMRFEGEDSPERRFTGTIIGAGDISS-EWSNSKWRSLK 316 689***************6..9**********************************************777.*********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 675 aa Download sequence |
MEKDDLYVEL WKLCAGPLVD VPKQGEMVYY FPQGHMEQLE ASMNQELKQK IPLFNLPSEI 60 PCLVVNIQLL AEQETDEVYA HITLQPTTDK SEPTSPLECE LEQPKPPVRS FCKILTASDT 120 STHGGFSVRR KHANECLPQL DMSEATPTQE LAAKDLHGYD WRFKHIFRGQ PRRHLLTTGW 180 STFVTSKRLV AGDAFVFLRG VDGDLRVGVR RHARQQSIMP SSVISSQSMH LGVLATASHA 240 VTAHSLFIVV YKPRTSQFII SKNKYVESVK NGFSVGKRFT MRFEGEDSPE RRFTGTIIGA 300 GDISSEWSNS KWRSLKVQWD ESATIPRPDR VSPWEIEPFE PSSSVNLIQP VLKSKRPRPM 360 DPPANLVKLN ASVFWYSQMN KRCQIGHADN GSEVQGAVTH DLSWIRGSKE CNNLINIGAG 420 YSSRLGPEGM WPSTQFLKMY HGSTEDGKTT RSTSILSGCN SMVTTRPDNV PAVDQLGSTR 480 NMESPAGCRI FGIDFSKNLS TMIHSEREPA STSTAPVITS TVLLREDAVC MVDKKQDSLI 540 SSQELTKHVT DLSQKVTPTK NGTAGSSRTR TKVQMQGVAV GRAVDLFTLS GYTELILELE 600 KMFDIKGELL AGNQWAIVYT DTEGDQMLAG NDPWSEFCKM ARKITIYSSE EVKKLKPKSK 660 VAASALLLEE RSHW* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 355 | 359 | KRPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61830.1 | 0.0 | ARF family protein |