PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0066s0093.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 593aa MW: 65458.6 Da PI: 7.7638

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0066s0093.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.3	1.2e-12	424	470	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq Kaladp0066s0093.1.p 424 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITELQ 470 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MRMGWNEEEK ALIASVLGNR AIDYLVASLG SNDGGQLMAL GTDENLNNKL SNLVERPDSS 60 EFTWNYAIFW QLSRSRNGDM VLGWGDGCCR EAKDGEELRV ATSPGHTFEE EDESRQRMRK 120 RVLHNLHAVL GGFEEDNFVL HLDRVTDTEM FFLASMYFSF PQGQGGPGMC LKLGRHFWLP 180 DLPTSSRDYC VRSFLATTAG FRTIVLVPTD MGVIELGSVR SVPESLEWVQ SLKSLFSLRS 240 QVRTNRPSNE NILSLKSENG GKAGGNTMIF GQDLNSRRHG LFREKLAIRK NDRPWTACNS 300 QGAFQLANIQ NGSTGWAQLC SNRQVSSPGM FTSAAAAVAA NNLHDLVNGA QQDFRLNNYQ 360 SKKQIQIDFS AAPRKPVVNQ PVSAESEHSD VEASCKEAGS SQAADRRPKK RGRKPANGRD 420 EPLNHVEAER QRREKLNQRF YALRAVVPNI SKMDKASLLG DAITYITELQ AKLKDLESER 480 IKLGNASMTG NTLTLGSSST AEVQNRVVDI ESSQDEIVVK VTCPLEAHPA NRVIQAFKDA 540 QINVVDSKLA AIDNTVFHTF VIKSSGCNQI TTERVTAALA RDSSQLELSS RG*

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MRMGWNEEEK ALIASVLGNR AIDYLVASLG SNDGGQLMAL GTDENLNNKL SNLVERPDSS  60
EFTWNYAIFW QLSRSRNGDM VLGWGDGCCR EAKDGEELRV ATSPGHTFEE EDESRQRMRK  120
RVLHNLHAVL GGFEEDNFVL HLDRVTDTEM FFLASMYFSF PQGQGGPGMC LKLGRHFWLP  180
DLPTSSRDYC VRSFLATTAG FRTIVLVPTD MGVIELGSVR SVPESLEWVQ SLKSLFSLRS  240
QVRTNRPSNE NILSLKSENG GKAGGNTMIF GQDLNSRRHG LFREKLAIRK NDRPWTACNS  300
QGAFQLANIQ NGSTGWAQLC SNRQVSSPGM FTSAAAAVAA NNLHDLVNGA QQDFRLNNYQ  360
SKKQIQIDFS AAPRKPVVNQ PVSAESEHSD VEASCKEAGS SQAADRRPKK RGRKPANGRD  420
EPLNHVEAER QRREKLNQRF YALRAVVPNI SKMDKASLLG DAITYITELQ AKLKDLESER  480
IKLGNASMTG NTLTLGSSST AEVQNRVVDI ESSQDEIVVK VTCPLEAHPA NRVIQAFKDA  540
QINVVDSKLA AIDNTVFHTF VIKSSGCNQI TTERVTAALA RDSSQLELSS RG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	406	414	RRPKKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-163	bHLH family protein