PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0065s0053.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YC
Protein Properties Length: 227aa    MW: 25700.5 Da    PI: 6.3024
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0065s0053.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC174.88.7e-55441471101
                NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd 87 
                          ql+sfw++q   ie++tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fi+eltlrsw+h+eenkrrtl+k+diaaa+ rtd
  Kaladp0065s0053.1.p  44 QLQSFWANQhqeIERVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFIFELTLRSWNHTEENKRRTLQKNDIAAAIGRTD 133
                          89*****999999***************************************************************************** PP

                NF-YC  88 ifdflvdivprdel 101
                          ifdflvdivpr++l
  Kaladp0065s0053.1.p 134 IFDFLVDIVPREDL 147
                          ***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MPYGMPPYQP NQMTVAAPGA ASGGQHQLAH QHINPLQQQQ LQQQLQSFWA NQHQEIERVT  60
DFKNHSLPLA RIKKIMKADE DVRMISAEAP VIFARACEMF IFELTLRSWN HTEENKRRTL  120
QKNDIAAAIG RTDIFDFLVD IVPREDLKDE MLGSVPRGSI PVGAPADMLP YPYMPMQHMP  180
QVGTPGMIMG KPMMDPSMYA QQPHPYMAPQ MWPQPQQPQE QSSSDQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117123RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.31e-78NF-YC family protein