PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0065s0023.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | GATA | ||||||||
Protein Properties | Length: 140aa MW: 15356.8 Da PI: 10.3671 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 58.1 | 1.1e-18 | 21 | 55 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ Cgt kTplWR+gp g+k+LCnaCG+++rk+++ Kaladp0065s0023.1.p 21 CAMCGTAKTPLWRSGPAGPKSLCNACGIKHRKRKS 55 9*******************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence |
MDLSHQQETI MVVDTESKKC CAMCGTAKTP LWRSGPAGPK SLCNACGIKH RKRKSLMCKK 60 ERDKKIRQSD SVTNPAAASA ASTQSSSKWK PRLEKSSSAN LRQSLKDLAP LQRSLRRQRS 120 EEEEAAMLLM LLSCGCVFA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06740.1 | 5e-20 | GATA family protein |