PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0064s0170.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 221aa MW: 24084.4 Da PI: 11.0443 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.7 | 4.9e-14 | 33 | 80 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+h e+E+rRRdriN + +Lr+l+Pk+ K++Ka+ L ++++++k Lq Kaladp0064s0170.1.p 33 RSHTEAEKRRRDRINGHLLTLRKLVPKS-----DKMDKAALLARVIQHVKGLQ 80 78*************************8.....7*****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MLSRRDTVAR RTTRRWPASS KNGRAAAAAS SSRSHTEAEK RRRDRINGHL LTLRKLVPKS 60 DKMDKAALLA RVIQHVKGLQ GEAAEVGKAL TVPTDVDEVR ISTYAAAAES TSGSQTDIFM 120 EASLCCEDRP ELFAEIDQAL QSLNLSTARV EMGSLGGRVR IILLLSGNGI RNDSCSSQNR 180 MINLKGSLNV ALNRIVNSTP SVSSYRVTSK RQRFFLPSDT * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40200.1 | 5e-42 | bHLH family protein |