PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0063s0028.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 551aa MW: 60530.4 Da PI: 8.743

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0063s0028.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	58.2	1.5e-18	259	308	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lre++P++ ++K +Ka+ L +A+eYI+ Lq Kaladp0063s0028.1.p 259 RSKHSATEQRRRSKINDRFQMLREIIPHS----DQKRDKASFLLEAIEYIQFLQ 308 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MELPRSFGPQ GTKPTHDFLS LYTTTSTTSH SQDPLLSPGS GSFLKTQNFL QPLEQVEMPG 60 VNDPAAISVN DKIQLPAASH LPPTSVEHIL PGGIGTYTIS HISCINQVSK PEVSLFTAAQ 120 ANSNERNDDN SNSSSQTGSG FTLWEESAVN MGKTGKENVR EGRSFVREPA SKLGKWAAER 180 PSQSSLNQRG SFAPASSSQV AAHKNRSLMN LIVSTTNTRE DENREMDFVI KKEGSPSERE 240 ESKMRAEGKN DERKANTPRS KHSATEQRRR SKINDRFQML REIIPHSDQK RDKASFLLEA 300 IEYIQFLQEK VYRYEGSFPG WNHESTKRIP LRNNHKPAKG FVDHGGPGTT SPFSTKFSDK 360 NIGAPSIVPR VVQKQVESDN NPIAFQMNDQ HLVRADMIVA SPIPLQPKVF VENGGTTTIF 420 PPKLVSDTET ATSQHTQRED VRRCEIECAT PSNDQELAIE GGTINISSTY SQGFLSTLTQ 480 ALQSLGVDLS QSRISVQIDL GKQNNIKLGS ATKMTKVDEL NSTSHVKANS TSPHISEYSG 540 QAVKRLKTGN *

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MELPRSFGPQ GTKPTHDFLS LYTTTSTTSH SQDPLLSPGS GSFLKTQNFL QPLEQVEMPG  60
VNDPAAISVN DKIQLPAASH LPPTSVEHIL PGGIGTYTIS HISCINQVSK PEVSLFTAAQ  120
ANSNERNDDN SNSSSQTGSG FTLWEESAVN MGKTGKENVR EGRSFVREPA SKLGKWAAER  180
PSQSSLNQRG SFAPASSSQV AAHKNRSLMN LIVSTTNTRE DENREMDFVI KKEGSPSERE  240
ESKMRAEGKN DERKANTPRS KHSATEQRRR SKINDRFQML REIIPHSDQK RDKASFLLEA  300
IEYIQFLQEK VYRYEGSFPG WNHESTKRIP LRNNHKPAKG FVDHGGPGTT SPFSTKFSDK  360
NIGAPSIVPR VVQKQVESDN NPIAFQMNDQ HLVRADMIVA SPIPLQPKVF VENGGTTTIF  420
PPKLVSDTET ATSQHTQRED VRRCEIECAT PSNDQELAIE GGTINISSTY SQGFLSTLTQ  480
ALQSLGVDLS QSRISVQIDL GKQNNIKLGS ATKMTKVDEL NSTSHVKANS TSPHISEYSG  540
QAVKRLKTGN *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	2e-76	bHLH family protein