PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0062s0040.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 266aa    MW: 29120.3 Da    PI: 9.8098
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0062s0040.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.12.9e-3193148156
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                          k+r+ W+++LH+rF++ ++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  Kaladp0062s0040.1.p  93 KQRRSWSQDLHRRFLHSLQQLGGADVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 148
                          79****************************************************97 PP
2Myb_DNA-binding36.31.3e-1195146148
                          TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                          r +W+++++ ++++  +qlGg    t+k I + m   g+t  ++ks++qky+
  Kaladp0062s0040.1.p  95 RRSWSQDLHRRFLHSLQQLGGAdvaTPKQIRELMKvDGLTNDEVKSHLQKYR 146
                          678*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MDESSEKSWH KSDWLRSVQL WNQSPDPPPK SEELSGEGLV AKKAKRSDNG EETKSVEEIH  60
GQTNGSSTSE TKEPQKSGGS KKEDREGSLS RRKQRRSWSQ DLHRRFLHSL QQLGGADVAT  120
PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPAPPPSQAS GSEAQAPQFV VVGGVWAPPS  180
DYTTMALPVP ANSEGDRASG APRSGMYTPM AAPPLALPHH QCQQFEFNQK PQVKSKNSES  240
RGDGLARCIS LSMSSATRSG PSPVY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.13e-54G2-like family protein