PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0062s0022.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 298aa    MW: 33036.5 Da    PI: 6.957
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0062s0022.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.73.7e-153077148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rg+WT eEd  l+++++  G g+W+  a++ g++Rt+k+c++rw++yl
  Kaladp0062s0022.1.p 30 RGPWTIEEDSMLIHYIACNGEGRWNMLAKCAGLKRTGKSCRLRWLNYL 77
                         89********************************************97 PP
2Myb_DNA-binding50.35.5e-1683126146
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                          rg+ +++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
  Kaladp0062s0022.1.p  83 RGNLSPQEQLLILELHSKWGNR-WSKIAQHLP-GRTDNEIKNFWRT 126
                          7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MSGGSVTNNG QGTKTSSMSN IEEDEAELRR GPWTIEEDSM LIHYIACNGE GRWNMLAKCA  60
GLKRTGKSCR LRWLNYLKPD VKRGNLSPQE QLLILELHSK WGNRWSKIAQ HLPGRTDNEI  120
KNFWRTRVQK QARRLNPDTT ADHQQLALPA FSQTNSSASS LAMSAQEHNI IPNVSNMSPP  180
RSWHHIFSPN HATTLLGESS SSSFPQPGVA DHHQTTTTTS PGNVITYGNS LYMDNGGNPL  240
FHNEGCYYVD NTHAADASGG FGLGDASVAP SGRRDWVLDD EVANSMWNNT DELWQFR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.12e-71MYB family protein