PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0061s0174.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 189aa MW: 20407.6 Da PI: 4.6978 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50 | 7.5e-16 | 40 | 88 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r ++ +Wv+eIr+p++ ++r++lg++ tae+Aa+a++aa+++l+g Kaladp0061s0174.1.p 40 IYRGIR--SRGPKWVSEIREPKK---TTRIWLGTYPTAEMAAAAYDAAALALKG 88 699**6..5678********854...5************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MDENSEAARA NLRRTDTPPN CHGDQQRARA HSSWKHTHPI YRGIRSRGPK WVSEIREPKK 60 TTRIWLGTYP TAEMAAAAYD AAALALKGSD AVLNFPECAG AYPVPESLSA ADVRAAAEAA 120 AATRAPPQPI NEEVQHGGEY VDEDVILDMP NFLADMAEGM MVSPPRMRPA DDDDDTGEGS 180 SSGLWDHP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 4e-32 | ERF family protein |