PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0061s0141.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 537aa MW: 57722.8 Da PI: 5.5156

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0061s0141.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.3	6.6e-09	330	378	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq Kaladp0061s0141.1.p 330 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 378 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 537 aa Download sequence
MSNETEFQPE KRAEDSVNYY SSHMQSDWPY NCGTIPGSST GFNSSARNVI CSSSCASDPM 60 MTSGPDSWDR SAVGPNVGFG IDVGNSSELM RSVLDGGWNP LSKGGLFLPN ANGPGVLPGS 120 LTQFPSDSGF IQRAVRLSCF GSGNFGDMVN PFARPESASP LAKRGPVARG PNIVNGSTPL 180 AFESDAHMAR AAECGGQNGS LPRNESLTRS LDESRPVRGA SSNEPDEADF RGSDWIEEPS 240 GAGGETCTVR GNAANKRKSA GQSASAEKII GVSSNSKSGE GAKLDGEPQL KPSPGTKNKG 300 SEKPEQKSQG TDPPKEEYIH VRARRGQATN SHSLAERVRR EKISERMKFL QDLVPGCSKV 360 TGKAVMLDEI INYVQSLQRQ VEFLSMKLST VSPQLDFDIE NLLAKDMFQP RAGPSGFPSE 420 VFMAYQHLIP SQTAQFQASL TISGSSPDLR RTTGSHPAAM RYKEPNSQLA NMWDEELHNV 480 IHMGFGDSGE PSKSQELNDA HQQETEARPA YTGHHLTVPL ATIQKLDSSM NDQDCE*

Sequence ? help Back to Top

Protein Sequence Length: 537 aa Download sequence

MSNETEFQPE KRAEDSVNYY SSHMQSDWPY NCGTIPGSST GFNSSARNVI CSSSCASDPM  60
MTSGPDSWDR SAVGPNVGFG IDVGNSSELM RSVLDGGWNP LSKGGLFLPN ANGPGVLPGS  120
LTQFPSDSGF IQRAVRLSCF GSGNFGDMVN PFARPESASP LAKRGPVARG PNIVNGSTPL  180
AFESDAHMAR AAECGGQNGS LPRNESLTRS LDESRPVRGA SSNEPDEADF RGSDWIEEPS  240
GAGGETCTVR GNAANKRKSA GQSASAEKII GVSSNSKSGE GAKLDGEPQL KPSPGTKNKG  300
SEKPEQKSQG TDPPKEEYIH VRARRGQATN SHSLAERVRR EKISERMKFL QDLVPGCSKV  360
TGKAVMLDEI INYVQSLQRQ VEFLSMKLST VSPQLDFDIE NLLAKDMFQP RAGPSGFPSE  420
VFMAYQHLIP SQTAQFQASL TISGSSPDLR RTTGSHPAAM RYKEPNSQLA NMWDEELHNV  480
IHMGFGDSGE PSKSQELNDA HQQETEARPA YTGHHLTVPL ATIQKLDSSM NDQDCE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	2e-87	bHLH family protein