PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0061s0096.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 295aa    MW: 31744.7 Da    PI: 6.8032
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0061s0096.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.37.5e-10143187554
                          HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                          h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  Kaladp0061s0096.2.p 143 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 187
                          99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MANNHHHHHH HSQAPTADDF LEHLLGIPSY AASSDSGLGG NDVGLGSHMM LQLSSGADGS  60
GHVGQGFHGS VFPLGLSLDQ GKPGGFLKLD EASGTVKRFV EESGDGRAPS VQNPMQNTVP  120
AAPHPPAMRP RVRARRGQAT DPHSIAERLR RERIAERIRA LQELVPSVNK TDRAAMLDEI  180
VDYVKFLRLQ VKVLSMSRLG GAGAVAPLVT DIPLSSVEEE SGGERRNQPA WEKWSNDGTE  240
QQVAKLMEEN VGAAMQFLQS KALCIMPINL ASIIYHTPQP DSSTLVTPER HPPS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148153RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.23e-89bHLH family protein