PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0061s0096.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 300aa    MW: 32359.4 Da    PI: 6.8434
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0061s0096.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.37.7e-10148192554
                          HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                          h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  Kaladp0061s0096.1.p 148 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 192
                          99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MANNHHHHHH HSQAPTADDF LEHLLGIPSY AASSDSGLGG NDVGLGSHMM LQLSSGADGS  60
GHVGQGFHGS VFPLGLSLDQ GKPGGFLKLD EASGTVKRFV EESGDGRAPS VQNMFHAQPM  120
QNTVPAAPHP PAMRPRVRAR RGQATDPHSI AERLRRERIA ERIRALQELV PSVNKTDRAA  180
MLDEIVDYVK FLRLQVKVLS MSRLGGAGAV APLVTDIPLS SVEEESGGER RNQPAWEKWS  240
NDGTEQQVAK LMEENVGAAM QFLQSKALCI MPINLASIIY HTPQPDSSTL VTPERHPPS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153158RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.22e-94bHLH family protein