PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0060s0189.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 378aa MW: 40727.7 Da PI: 9.8468

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0060s0189.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.9	1.3e-19	81	126	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEdell +v+++G ++W++I+r ++ gR++k+c++rw + Kaladp0060s0189.1.p 81 KGPWSPEEDELLQSLVEKHGARNWSLISRAIP-GRSGKSCRLRWCNQ 126 79****************************.*********985 PP
2	Myb_DNA-binding	54.4	2.8e-17	133	177	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++T+eEde +++a+++ G++ W+tIar ++ gRt++ +k++w++ Kaladp0060s0189.1.p 133 RRPFTAEEDEVILRAHARVGNR-WATIARLLN-GRTDNAVKNHWNST 177 679*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MQRGNGSAAD ACPSSQLYPK IPPLTHSTAF PQRCQRQRRV YNRRRVRESR DPTDSIHPRS 60 KVSTLNRSMA SGGGVLGEKI KGPWSPEEDE LLQSLVEKHG ARNWSLISRA IPGRSGKSCR 120 LRWCNQLSPE VERRPFTAEE DEVILRAHAR VGNRWATIAR LLNGRTDNAV KNHWNSTLKR 180 KCPWIVEDHT TGGGGGELKR SVSAGAAASP SGSDASDSSV HILSSIPAGR KTVGGLLWLG 240 GNETASYGDD GVATELSLSL SMPGAESSQS SGGQPQLIEF GKQPQPEPAV KMGDVTTELG 300 LAAVGSQESR KEKEKEKEEE IIGGSGSQPL TTEFWGTMRE MIRKEVRSYM SGGGVNGGGV 360 CARGDMAMTR IRIGRSD*

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MQRGNGSAAD ACPSSQLYPK IPPLTHSTAF PQRCQRQRRV YNRRRVRESR DPTDSIHPRS  60
KVSTLNRSMA SGGGVLGEKI KGPWSPEEDE LLQSLVEKHG ARNWSLISRA IPGRSGKSCR  120
LRWCNQLSPE VERRPFTAEE DEVILRAHAR VGNRWATIAR LLNGRTDNAV KNHWNSTLKR  180
KCPWIVEDHT TGGGGGELKR SVSAGAAASP SGSDASDSSV HILSSIPAGR KTVGGLLWLG  240
GNETASYGDD GVATELSLSL SMPGAESSQS SGGQPQLIEF GKQPQPEPAV KMGDVTTELG  300
LAAVGSQESR KEKEKEKEEE IIGGSGSQPL TTEFWGTMRE MIRKEVRSYM SGGGVNGGGV  360
CARGDMAMTR IRIGRSD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	3e-63	MYB family protein