PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0060s0179.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 161aa MW: 17311.3 Da PI: 10.3011 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.4 | 5.7e-16 | 32 | 80 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y GVr +k +g+WvAeIr+p++ r r++lg++ ta Aa+a++ a l+g Kaladp0060s0179.1.p 32 YNGVRMRK-WGKWVAEIREPKK---RSRIWLGTYKTAVAAARAHDVALFHLRG 80 78***999.**********965...5**********************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MEEKQSSSGG GGGSSHGQSR AVFGSGRGGR EYNGVRMRKW GKWVAEIREP KKRSRIWLGT 60 YKTAVAAARA HDVALFHLRG RSEKLNFPED FVGRVSVEMS AEEIRRMATA VGAEVDAAEL 120 GRRRRRDVNE PPRCGGAEGG DEEGGGCGGS GRPDLNRLPD * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23340.1 | 6e-29 | ERF family protein |