PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0060s0175.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 198aa    MW: 22108.1 Da    PI: 7.842
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0060s0175.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.12.4e-1681127455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           hn+ E+rRR++iN+++  L++l+P++      K +Ka++L  A+eY+k+Lq
  Kaladp0060s0175.2.p  81 VHNMSEKRRRSKINEKMKALQDLIPNS-----NKTDKASMLDDAIEYLKQLQ 127
                          6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MFDHAAAPSP AFSDSDEISA LLRQILHRSS NQCNRQFQTP TELPIDDLVE HDGPSEEGLE  60
ALVEEATKRR RSSKRRRAAE VHNMSEKRRR SKINEKMKAL QDLIPNSNKT DKASMLDDAI  120
EYLKQLQLRV QMLTLRNGLI LHPMSLPRRP ATQPMLGVMS GASPEALKLE SSSPGDDLLK  180
SHPASEVVFN YGLVHPH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16890KRRRSSKRRRAAEVHNMSEKRRR
26898KRRRSSKRRRAAEVHNMSEKRRRSKINEKMK
36991KRRRSSKRRRAAEVHNMSEKRRR
47496KRRRSSKRRRAAEVHNMSEKRRR
57597KRRRSSKRRRAAEVHNMSEKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.19e-38bHLH family protein