PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0060s0175.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 200aa MW: 22264.3 Da PI: 7.842

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0060s0175.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51.1	2.4e-16	83	129	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ E+rRR++iN+++ L++l+P++ K +Ka++L A+eY+k+Lq Kaladp0060s0175.1.p 83 VHNMSEKRRRSKINEKMKALQDLIPNS-----NKTDKASMLDDAIEYLKQLQ 129 6***********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MFDHAAAPSP AFSDSDEISA LLRQILHRSS NQCNRQFQTP TELPIDDLVE HDGPSEVGEG 60 LEALVEEATK RRRSSKRRRA AEVHNMSEKR RRSKINEKMK ALQDLIPNSN KTDKASMLDD 120 AIEYLKQLQL RVQMLTLRNG LILHPMSLPR RPATQPMLGV MSGASPEALK LESSSPGDDL 180 LKSHPASEVV FNYGLVHPH*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	70	92	KRRRSSKRRRAAEVHNMSEKRRR
2	70	100	KRRRSSKRRRAAEVHNMSEKRRRSKINEKMK
3	71	93	KRRRSSKRRRAAEVHNMSEKRRR
4	76	98	KRRRSSKRRRAAEVHNMSEKRRR
5	77	99	KRRRSSKRRRAAEVHNMSEKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36930.1	2e-34	bHLH family protein