PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0060s0169.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 190aa MW: 21509.2 Da PI: 9.7051 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.8 | 9.3e-09 | 105 | 145 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P +K++ a++L +A++Y+k L Kaladp0060s0169.1.p 105 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 145 699*****************87.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MDASMELMMT MMQSDTGRRH HTADFVVHPQ PPPPPHHFPL SELHNPGYAA LPQMSELERQ 60 SSMAAMREMI FRIAAMQPVQ IDPEAVKPPK RKNVRISKDP QSVAARHRRE RISERIRILQ 120 RLVPGGTKMD TASMLDEAIH YVKFLKKQVQ SLERAGVAAA GFEEFPVRVM EGQMMMMGMG 180 CVQQQQMMC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50330.1 | 3e-45 | bHLH family protein |