PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0060s0149.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

LBD

Protein Properties

Length: 350aa MW: 38380.8 Da PI: 5.757

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0060s0149.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	133.8	6.7e-42	6	105	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +CaaCk++rrkC+++C++apyfp e+p+kf nvhk+FG snv+k+l++l++ +reda++sl++eAear+rdP+yG+vg+i+ lqq+l+q Kaladp0060s0149.1.p 6 PCAACKFQRRKCTPECIFAPYFPPEDPQKFVNVHKVFGGSNVSKILSDLNPAQREDAAKSLAFEAEARLRDPIYGCVGFISYLQQRLKQI 95 7*************************************************************************************** PP DUF260 91 kaelallkee 100 +++l +++e Kaladp0060s0149.1.p 96 QVDLTNARKE 105 **999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MSSNSPCAAC KFQRRKCTPE CIFAPYFPPE DPQKFVNVHK VFGGSNVSKI LSDLNPAQRE 60 DAAKSLAFEA EARLRDPIYG CVGFISYLQQ RLKQIQVDLT NARKELSSYI GPSAMLPTLP 120 QHAYGQMVYH PQQQQMMGNQ LSSSSTFPYT NLMGTPAVYG PGTSQQLVIR EQQQQQIIGG 180 GNPTSSAAAL PYTSLMPSMI GDGGSSQPLL IREPQQLHGV DPQQYGAVDA AEQHEMIRNY 240 EQQQQDYFLL RSSDQYEPGG GQILGSGFIQ MAADETGGGP SLALGVNYDN PYSQVQQQQQ 300 QEVVHQSLQA QLVLQSRQQH AEHVLQTPLH QHPQNNADSN EGRSADPSC*

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MSSNSPCAAC KFQRRKCTPE CIFAPYFPPE DPQKFVNVHK VFGGSNVSKI LSDLNPAQRE  60
DAAKSLAFEA EARLRDPIYG CVGFISYLQQ RLKQIQVDLT NARKELSSYI GPSAMLPTLP  120
QHAYGQMVYH PQQQQMMGNQ LSSSSTFPYT NLMGTPAVYG PGTSQQLVIR EQQQQQIIGG  180
GNPTSSAAAL PYTSLMPSMI GDGGSSQPLL IREPQQLHGV DPQQYGAVDA AEQHEMIRNY  240
EQQQQDYFLL RSSDQYEPGG GQILGSGFIQ MAADETGGGP SLALGVNYDN PYSQVQQQQQ  300
QEVVHQSLQA QLVLQSRQQH AEHVLQTPLH QHPQNNADSN EGRSADPSC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	2e-58	LBD family protein