PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0060s0073.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | GATA | ||||||||
Protein Properties | Length: 252aa MW: 27391.6 Da PI: 7.973 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 61.7 | 8.7e-20 | 125 | 159 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nC +t+TplWR+gp g+k+LCnaCG++y+k+++ Kaladp0060s0073.1.p 125 CANCDATSTPLWRNGPKGPKSLCNACGIRYKKEER 159 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MMHNNMYYSQ SNGGQQPCYD YDYYCSADPY SYHGFDSTSS STSSHVDCTL SLGTPSTRSE 60 AGGEQTKKQS SRRGGSRVSN FCRDLLQQTT SSSSKHSAAQ NGTNSYSKSG RVSGGGRDPL 120 VARRCANCDA TSTPLWRNGP KGPKSLCNAC GIRYKKEERR ASAAASNGSG ASAMESQYAS 180 SEHYYSNQSY THHHQSQKMN CLFPAGANEY HRYVDADEDG GHYEHSGNGG VSFLPWMLNV 240 ADRPSLVHDF T* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50870.1 | 3e-46 | GATA family protein |