PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0059s0358.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | GATA | ||||||||
Protein Properties | Length: 159aa MW: 16665.8 Da PI: 9.8825 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 57.8 | 1.5e-18 | 43 | 77 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs Cgt+kTplWR gp g+k+LCnaCG++ rk+++ Kaladp0059s0358.1.p 43 CSDCGTSKTPLWRGGPAGPKSLCNACGIRSRKRRR 77 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MFDQKGSEIE EVKSNNSSTI TAALACDASS SSGSEGQPIK KTCSDCGTSK TPLWRGGPAG 60 PKSLCNACGI RSRKRRRALL GLTKPEEKRS KKTTGSTASN GGVTGVSGCS GEEKLTSHQK 120 LTGLTWQRST AEKYRRVLGE EEQAAVLLMA MAYGSVFA* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 73 | 77 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49300.1 | 2e-36 | GATA family protein |