PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0059s0026.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 261aa MW: 28138.6 Da PI: 7.3453 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.8 | 1.6e-12 | 73 | 120 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+h e+E+rRRdriN + +Lr+l+Pk+ K++Ka+ L +++ +k Lq Kaladp0059s0026.1.p 73 RSHTEAEKRRRDRINGHLLTLRKLVPKS-----DKMDKAALLACVIQRVKGLQ 120 78*************************8.....7************9999998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 261 aa Download sequence |
MENFRCSGWF EAGDFAHSQS QMTAGFSSSE PLQATGDTGM FSSVQLQGLP SYWPGFEDGF 60 GDGRAAAAAS SSRSHTEAEK RRRDRINGHL LTLRKLVPKS DKMDKAALLA CVIQRVKGLQ 120 GEAAEVGKAL TVPTDVDEVR ISTYAAAAES TSGSQTDIFM EASLCCEDRP ELFAEIDQAL 180 QSLNLSTARV EMGSLGGRVR IILLLSGNGI RNDSCSTQNR MINLKGSLNV ALNRIVNSTP 240 SVSSYRVTSK RQRFFLPSDT * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G40200.1 | 4e-43 | bHLH family protein |