PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0058s0411.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 394aa MW: 42386 Da PI: 7.7258

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0058s0411.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.3	1.3e-13	135	184	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++h ++Er+RR+++N+ ++ Lr+l+P + kK + a+i +++YI++Lq Kaladp0058s0411.1.p 135 VSHIAVERNRRKQMNEHLAVLRQLMPCF---YVKKGDQASIIGGVIDYINELQ 184 589**********************9...9******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MGTEHLTAPT NLCDLFHESE LCPDEILTIL QSLDDNSYSN IFNVAAAAAA TPAPLMVDKT 60 DTNSKNKKRK KPAKTASSSS PRFGSGEESD EDHALLSQRK SVKGQKVSLP ATSMEDGSGE 120 DGGGPGGCNS SGKVVSHIAV ERNRRKQMNE HLAVLRQLMP CFYVKKGDQA SIIGGVIDYI 180 NELQQVLQSL EAKKQRKIYT NEVGLSPRVV SSPRVIPQQH SNPSHPSPRK PPLSPRPLLN 240 LPISPRTPQS TSPCHNKPLT QPQIQPSSIT SPTSNSNNSS CSSVADMIMM MSSYNNASNN 300 GVANELVASL KSSFADVEVK FCGPNLELKT LSSKISGQTV KIVSAIEDLA LEILRVSIST 360 AEETMLNSFT IKIGIECKLS AEELAQQIQQ TFC*

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MGTEHLTAPT NLCDLFHESE LCPDEILTIL QSLDDNSYSN IFNVAAAAAA TPAPLMVDKT  60
DTNSKNKKRK KPAKTASSSS PRFGSGEESD EDHALLSQRK SVKGQKVSLP ATSMEDGSGE  120
DGGGPGGCNS SGKVVSHIAV ERNRRKQMNE HLAVLRQLMP CFYVKKGDQA SIIGGVIDYI  180
NELQQVLQSL EAKKQRKIYT NEVGLSPRVV SSPRVIPQQH SNPSHPSPRK PPLSPRPLLN  240
LPISPRTPQS TSPCHNKPLT QPQIQPSSIT SPTSNSNNSS CSSVADMIMM MSSYNNASNN  300
GVANELVASL KSSFADVEVK FCGPNLELKT LSSKISGQTV KIVSAIEDLA LEILRVSIST  360
AEETMLNSFT IKIGIECKLS AEELAQQIQQ TFC*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	67	71	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53210.1	1e-38	bHLH family protein