PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0058s0340.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 614aa MW: 68582.9 Da PI: 5.3373

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0058s0340.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.7	4.7e-17	112	157	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +grW+ eEd +l ++v++lG+ +W++Ia+ m gR +kqc++rw++ Kaladp0058s0340.1.p 112 KGRWSHEEDRQLTELVNELGTTQWSSIAKNMK-GRVGKQCRERWLNQ 157 79***************************9.*********996 PP
2	Myb_DNA-binding	53	7.7e-17	164	206	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +W++eEd++l+ a+k+lG++ W+ I ++++ gRt++ +k++w+ Kaladp0058s0340.1.p 164 REAWSAEEDQILIAAHKELGTK-WSEITKRLP-GRTENAVKNYWN 206 789*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 614 aa Download sequence
MEPENEGLFP LDSIMHICID QAQPVYNHSK QETIDHDRSD SIQSMIVQQQ ITDQINAADG 60 LLCVTGHLAT NNRDQEMTKV ASSSFDNEKS TKAQLTKRAT RIKSEVSASG VKGRWSHEED 120 RQLTELVNEL GTTQWSSIAK NMKGRVGKQC RERWLNQLMP DIKREAWSAE EDQILIAAHK 180 ELGTKWSEIT KRLPGRTENA VKNYWNATKR RQEAKRKTMA WKHRNSGLLQ NYIKDLSTTE 240 RPSPSSSTNS DNFTVSNLLS GQGSLVSEDF SGFGSSGETF FQNCIRSFPP KRSSPPSSFN 300 SYNVGNINFC NNLPSSPNFN PSDGFKANGS SKEIFFDRIF PPTRLSRTSS FNRENVGDID 360 IPGNTIVYSQ PSDQEDVPSG GFVGDGRKMK MLSPTMTSFC PPSSLNITNF DNTYIYNKNA 420 ILGLTSEQNK VSFGGFVSDE EIKESFSQND INSSFPRVKP YKECSTNRNS TNNVNLLCNT 480 ASYCLSSIDS NAYSAAFDGD GKKRETFFED DSKSLSHPKW SFPLCSLDSY SIGDVSFYDK 540 AVTYELPTGQ KNDPFEGFTN GGNKMKMQAG DSDGIYDLKT WFEDFESIRE LTTLMGGADQ 600 DKDMNSLADM TYI*

Sequence ? help Back to Top

Protein Sequence Length: 614 aa Download sequence

MEPENEGLFP LDSIMHICID QAQPVYNHSK QETIDHDRSD SIQSMIVQQQ ITDQINAADG  60
LLCVTGHLAT NNRDQEMTKV ASSSFDNEKS TKAQLTKRAT RIKSEVSASG VKGRWSHEED  120
RQLTELVNEL GTTQWSSIAK NMKGRVGKQC RERWLNQLMP DIKREAWSAE EDQILIAAHK  180
ELGTKWSEIT KRLPGRTENA VKNYWNATKR RQEAKRKTMA WKHRNSGLLQ NYIKDLSTTE  240
RPSPSSSTNS DNFTVSNLLS GQGSLVSEDF SGFGSSGETF FQNCIRSFPP KRSSPPSSFN  300
SYNVGNINFC NNLPSSPNFN PSDGFKANGS SKEIFFDRIF PPTRLSRTSS FNRENVGDID  360
IPGNTIVYSQ PSDQEDVPSG GFVGDGRKMK MLSPTMTSFC PPSSLNITNF DNTYIYNKNA  420
ILGLTSEQNK VSFGGFVSDE EIKESFSQND INSSFPRVKP YKECSTNRNS TNNVNLLCNT  480
ASYCLSSIDS NAYSAAFDGD GKKRETFFED DSKSLSHPKW SFPLCSLDSY SIGDVSFYDK  540
AVTYELPTGQ KNDPFEGFTN GGNKMKMQAG DSDGIYDLKT WFEDFESIRE LTTLMGGADQ  600
DKDMNSLADM TYI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	2e-48	MYB family protein