PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0055s0561.6.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | NF-YC | ||||||||
Protein Properties | Length: 261aa MW: 29137.8 Da PI: 6.5098 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 176.8 | 2.1e-55 | 79 | 181 | 2 | 101 |
NF-YC 2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdi 88 l++fw++q ie++tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+t+tdi Kaladp0055s0561.6.p 79 LQNFWANQyqeIEQTTDFKNHNLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITSTDI 168 89*****9999******************************************************************************* PP NF-YC 89 fdflvdivprdel 101 fdflvdivpr++l Kaladp0055s0561.6.p 169 FDFLVDIVPREDL 181 **********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MEQQGHTQAP ATGVGGGSAQ MPYGVTSYQP NQILGSTPQG SARSPTQPGM PGSSAQVAQH 60 QLAYQHIHHQ QQQQLQQHLQ NFWANQYQEI EQTTDFKNHN LPLARIKKIM KADEDVRMIS 120 AEAPVIFARA CEMFILELTL RSWNHTEENK RRTLQKNDIA AAITSTDIFD FLVDIVPRED 180 LKDEVFANMP RGGAIPATGM PDALPYYYMA PQHAPPVGAP GMIMGRPVMD QPIYGQQSRP 240 YMGQQMWPHN QPQQRPPEDS * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 151 | 157 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 1e-80 | NF-YC family protein |