PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0055s0561.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YC
Protein Properties Length: 261aa    MW: 29137.8 Da    PI: 6.5098
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0055s0561.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC176.82.1e-55791812101
                NF-YC   2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdi 88 
                          l++fw++q   ie++tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+t+tdi
  Kaladp0055s0561.1.p  79 LQNFWANQyqeIEQTTDFKNHNLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITSTDI 168
                          89*****9999******************************************************************************* PP

                NF-YC  89 fdflvdivprdel 101
                          fdflvdivpr++l
  Kaladp0055s0561.1.p 169 FDFLVDIVPREDL 181
                          **********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MEQQGHTQAP ATGVGGGSAQ MPYGVTSYQP NQILGSTPQG SARSPTQPGM PGSSAQVAQH  60
QLAYQHIHHQ QQQQLQQHLQ NFWANQYQEI EQTTDFKNHN LPLARIKKIM KADEDVRMIS  120
AEAPVIFARA CEMFILELTL RSWNHTEENK RRTLQKNDIA AAITSTDIFD FLVDIVPRED  180
LKDEVFANMP RGGAIPATGM PDALPYYYMA PQHAPPVGAP GMIMGRPVMD QPIYGQQSRP  240
YMGQQMWPHN QPQQRPPEDS *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151157RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.31e-80NF-YC family protein